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Title: Transcriptome analysis of plant hormone-related tomato (Solanum lycopersicum) genes in a Sunlight-Type plant factory
Authors: Tanigaki, Yusuke
Higashi, Takanobu
Takayama, Kotaro
Nagano, Atsushi J.
Honjo, Mie N.
Fukuda, Hirokazu
Author's alias: 本庄, 三恵
Issue Date: 1-Dec-2015
Publisher: Public Library of Science
Journal title: PLOS ONE
Volume: 10
Issue: 12
Thesis number: e0143412
Abstract: In plant factories, measurements of plant conditions are necessary at an early stage of growth to predict harvest times of high value-Added crops. Moreover, harvest qualities depend largely on environmental stresses that elicit plant hormone responses. However, the complexities of plant hormone networks have not been characterized under nonstress conditions. In the present study, we determined temporal expression profiles of all genes and then focused on plant hormone pathways using RNA-Seq analyses of gene expression in tomato leaves every 2 h for 48 h. In these experiments, temporally expressed genes were found in the hormone synthesis pathways for salicylic acid, abscisic acid, ethylene, and jasmonic acid. The timing of CAB expression 1 (TOC1) and abscisic acid insensitive 1 (ABA1) and open stomata 1 (OST1) control gating stomata. In this study, compare with tomato and Arabidopsis thaliana, expression patterns of TOC1 have similarity. In contrast, expression patterns of tomato ABI1 and OST1 had expression peak at different time. These findings suggest that the regulation of gating stomata does not depend predominantly on TOC1 and significantly reflects the extracellular environment. The present data provide new insights into relationships between temporally expressed plant hormone-related genes and clock genes under normal sunlight conditions.
Rights: © 2015 Tanigaki et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
URI: http://hdl.handle.net/2433/210393
DOI(Published Version): 10.1371/journal.pone.0143412
PubMed ID: 26624004
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