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書誌情報 | ファイル |
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Computing smallest intervention strategies for multiple metabolic networks in a boolean model. Lu, Wei; Tamura, Takeyuki; Song, Jiangning; Akutsu, Tatsuya (2015-02-15) Journal of computational biology, 22(2): 85-110 | |
Conditional random field approach to prediction of protein-protein interactions using domain information. Hayashida, Morihiro; Kamada, Mayumi; Song, Jiangning; Akutsu, Tatsuya (2011-06) BMC systems biology, 5 Suppl 1 | |
MSNet-4mC: Learning effective multi-scale representations for identifying DNA N4-methylcytosine sites Liu, Chunting; Song, Jiangning; Ogata, Hiroyuki; Akutsu, Tatsuya (2022-12-01) Bioinformatics, 38(23): 5160-5167 | |
PhosphoPredict: A bioinformatics tool for prediction of human kinase-specific phosphorylation substrates and sites by integrating heterogeneous feature selection Song, Jiangning; Wang, Huilin; Wang, Jiawei; Leier, André; Marquez-Lago, Tatiana; Yang, Bingjiao; Zhang, Ziding; Akutsu, Tatsuya; Webb, Geoffrey I.; Daly, Roger J. (2017-07-31) Scientific Reports, 7 | |
SecretEPDB: a comprehensive web-based resource for secreted effector proteins of the bacterial types III, IV and VI secretion systems An, Yi; Wang, Jiawei; Li, Chen; Revote, Jerico; Zhang, Yang; Naderer, Thomas; Hayashida, Morihiro; Akutsu, Tatsuya; Webb, Geoffrey I.; Lithgow, Trevor; Song, Jiangning (2017-01-23) Scientific Reports, 7 | |
ReCGBM: a gradient boosting-based method for predicting human dicer cleavage sites Liu, Pengyu; Song, Jiangning; Lin, Chun-Yu; Akutsu, Tatsuya (2021) BMC Bioinformatics, 22 | |
PFresGO: an attention mechanism-based deep-learning approach for protein annotation by integrating gene ontology inter-relationships Pan, Tong; Li, Chen; Bi, Yue; Wang, Zhikang; Gasser, Robin B; Purcell, Anthony W; Akutsu, Tatsuya; Webb, Geoffrey I; Imoto, Seiya; Song, Jiangning (2023-03) Bioinformatics, 39(3) |