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dc.contributor.authorAoki, Kazuhiroen
dc.contributor.authorYamada, Masashien
dc.contributor.authorKunida, Katsuyukien
dc.contributor.authorYasuda, Shuheien
dc.contributor.authorMatsuda, Michiyukien
dc.contributor.alternative青木, 一洋ja
dc.contributor.alternative山田, 将士ja
dc.contributor.alternative国田, 勝行ja
dc.contributor.alternative安田, 周平ja
dc.contributor.alternative松田, 道行ja
dc.date.accessioned2011-07-21T06:43:37Z-
dc.date.available2011-07-21T06:43:37Z-
dc.date.issued2011-08-02-
dc.identifier.citationAoki K, Yamada M, Kunida K, Yasuda S, Matsuda M. Processive phosphorylation of ERK MAP kinase in mammalian cells. Proc Natl Acad Sci U S A. 2011 Jul 18. [Epub ahead of print]-
dc.identifier.issn0027-8424-
dc.identifier.urihttp://hdl.handle.net/2433/143060-
dc.description癌遺伝子情報伝達経路の実測データに基づくシミュレーションモデルの構築~コンピューターによる抗癌剤デザインに向けて~. 京都大学プレスリリース. 2011-07-19.ja
dc.description.abstractThe mitogen-activated protein (MAP) kinase pathway is comprised of a three-tiered kinase cascade. The distributive kinetic mechanism of two-site MAP kinase phosphorylation inherently generates a nonlinear switch-like response. However, a linear graded response of MAP kinase has also been observed in mammalian cells, and its molecular mechanism remains unclear. To dissect these input-output behaviors, we quantitatively measured the kinetic parameters involved in the MEK (MAPK/ERK kinase)-ERK MAP kinase signaling module in HeLa cells. Using a numerical analysis based on experimentally determined parameters, we predicted in silico and validated in vivo that ERK is processively phosphorylated in HeLa cells. Finally, we identified molecular crowding as a critical factor that converts distributive phosphorylation into processive phosphorylation. We proposed the term quasi-processive phosphorylation to describe this mode of ERK phosphorylation that is operated under the physiological condition of molecular crowding. The generality of this phenomenon may provide a new paradigm for a diverse set of biochemical reactions including multiple posttranslational modifications.en
dc.format.mimetypeapplication/pdf-
dc.language.isoeng-
dc.publisherNational Academy of Sciencesen
dc.rightsThis is not the published version. Please cite only the published version.en
dc.rightsこの論文は出版社版でありません。引用の際には出版社版をご確認ご利用ください。ja
dc.subjectsimulationen
dc.subjectphos-tagen
dc.subjectcrowderen
dc.subjectquantitative parameteren
dc.subjectEGFen
dc.titleProcessive phosphorylation of ERK MAP kinase in mammalian cells.en
dc.typejournal article-
dc.type.niitypeJournal Article-
dc.identifier.ncidAA10808769-
dc.identifier.jtitleProceedings of the National Academy of Sciences (PNAS)en
dc.identifier.volume108-
dc.identifier.issue31-
dc.identifier.spage12675-
dc.identifier.epage12680-
dc.relation.doi10.1073/pnas.1104030108-
dc.textversionauthor-
dc.addressLaboratory of Bioimaging and Cell Signaling, Graduate School of Biostudies, Kyoto University; Precursory Research for Embryonic Science and Technology (PREST), Japan Science and Technology Agency (JST)en
dc.addressDepartment of Pathology and Biology of Diseases, Graduate School of Medicine, Kyoto Universityen
dc.addressDepartment of Pathology and Biology of Diseases, Graduate School of Medicine, Kyoto Universityen
dc.addressDepartment of Pathology and Biology of Diseases, Graduate School of Medicine, Kyoto Universityen
dc.addressDepartment of Pathology and Biology of Diseases, Graduate School of Medicine, Kyoto Universityen
dc.identifier.pmid21768338-
dc.relation.urlhttps://www.kyoto-u.ac.jp/static/ja/news_data/h/h1/news6/2011/110719_1.htm-
dc.relation.urlhttp://www.pnas.org/content/early/2011/07/12/1104030108.full.pdf+html-
dcterms.accessRightsopen access-
dc.identifier.pissn0027-8424-
dc.identifier.eissn1091-6490-
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