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dc.contributor.authorAoki, Kazuhiroen
dc.contributor.authorYamada, Masashien
dc.contributor.authorKunida, Katsuyukien
dc.contributor.authorYasuda, Shuheien
dc.contributor.authorMatsuda, Michiyukien
dc.contributor.alternative青木, 一洋ja
dc.date.accessioned2011-07-21T06:43:37Z-
dc.date.available2011-07-21T06:43:37Z-
dc.date.issued2011-07-18-
dc.identifier.citationAoki K, Yamada M, Kunida K, Yasuda S, Matsuda M. Processive phosphorylation of ERK MAP kinase in mammalian cells. Proc Natl Acad Sci U S A. 2011 Jul 18. [Epub ahead of print]-
dc.identifier.issn0027-8424-
dc.identifier.urihttp://hdl.handle.net/2433/143060-
dc.description癌遺伝子情報伝達経路の実測データに基づくシミュレーションモデルの構築~コンピューターによる抗癌剤デザインに向けて~. 京都大学プレスリリース. 2011-07-19.ja
dc.description.abstractThe mitogen-activated protein (MAP) kinase pathway is comprised of a three-tiered kinase cascade. The distributive kinetic mechanism of two-site MAP kinase phosphorylation inherently generates a nonlinear switch-like response. However, a linear graded response of MAP kinase has also been observed in mammalian cells, and its molecular mechanism remains unclear. To dissect these input-output behaviors, we quantitatively measured the kinetic parameters involved in the MEK (MAPK/ERK kinase)-ERK MAP kinase signaling module in HeLa cells. Using a numerical analysis based on experimentally determined parameters, we predicted in silico and validated in vivo that ERK is processively phosphorylated in HeLa cells. Finally, we identified molecular crowding as a critical factor that converts distributive phosphorylation into processive phosphorylation. We proposed the term quasi-processive phosphorylation to describe this mode of ERK phosphorylation that is operated under the physiological condition of molecular crowding. The generality of this phenomenon may provide a new paradigm for a diverse set of biochemical reactions including multiple posttranslational modifications.en
dc.format.mimetypeapplication/pdf-
dc.language.isoeng-
dc.publisherNational Academy of Sciencesen
dc.rightsThis is not the published version. Please cite only the published version.en
dc.rightsこの論文は出版社版でありません。引用の際には出版社版をご確認ご利用ください。ja
dc.subjectsimulationen
dc.subjectphos-tagen
dc.subjectcrowderen
dc.subjectquantitative parameteren
dc.subjectEGFen
dc.titleProcessive phosphorylation of ERK MAP kinase in mammalian cells.en
dc.typejournal article-
dc.type.niitypeJournal Article-
dc.identifier.ncidAA10808769-
dc.identifier.jtitleProceedings of the National Academy of Sciences of the United States of Americaen
dc.identifier.volume108-
dc.identifier.issue31-
dc.identifier.spage12675-
dc.identifier.epage12680-
dc.relation.doi10.1073/pnas.1104030108-
dc.textversionauthor-
dc.identifier.pmid21768338-
dc.relation.urlhttps://www.kyoto-u.ac.jp/static/ja/news_data/h/h1/news6/2011/110719_1.htm-
dc.relation.urlhttp://www.pnas.org/content/early/2011/07/12/1104030108.full.pdf+html-
dcterms.accessRightsopen access-
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