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dc.contributor.authorNishimura, Yosukeen
dc.contributor.authorYoshida, Takashien
dc.contributor.authorKuronishi, Megumien
dc.contributor.authorUehara, Hideyaen
dc.contributor.authorOgata, Hiroyukien
dc.contributor.authorGoto, Susumuen
dc.contributor.alternative西村, 陽介ja
dc.contributor.alternative黒西, 愛ja
dc.contributor.alternative上原, 英也ja
dc.contributor.alternative緒方, 博之ja
dc.contributor.alternative五斗, 進ja
dc.date.accessioned2017-07-27T07:59:50Z-
dc.date.available2017-07-27T07:59:50Z-
dc.date.issued2017-03-30-
dc.identifier.issn1367-4803-
dc.identifier.urihttp://hdl.handle.net/2433/226604-
dc.description.abstractViPTree is a web server provided through GenomeNet to generate viral proteomic trees for classification of viruses based on genome-wide similarities. Users can upload viral genomes sequenced either by genomics or metagenomics. ViPTree generates proteomic trees for the uploaded genomes together with flexibly selected reference viral genomes. ViPTree also serves as a platform to visually investigate genomic alignments and automatically annotated gene functions for the uploaded viral genomes, thus providing virus researchers the first choice for classifying and understanding newly sequenced viral genomes.en
dc.format.mimetypeapplication/pdf-
dc.language.isoeng-
dc.publisherOxford University Press (OUP)en
dc.rightsThis is a pre-copyedited, author-produced PDF of an article accepted for publication in 'Bioinformatics' following peer review. The version of record [Yosuke Nishimura, Takashi Yoshida, Megumi Kuronishi , Hideya Uehara, Hiroyuki Ogata, Susumu Goto. ViPTree: the viral proteomic tree server. Bioinformatics btx157.] is available online at: https://doi.org/10.1093/bioinformatics/btx157en
dc.rightsThe full-text file will be made open to the public on 30 March 2018 in accordance with publisher's 'Terms and Conditions for Self-Archiving'en
dc.rightsThis is not the published version. Please cite only the published version.en
dc.rightsこの論文は出版社版でありません。引用の際には出版社版をご確認ご利用ください。ja
dc.subjectStatistics and Probabilityen
dc.subjectComputational Theory and Mathematicsen
dc.subjectBiochemistryen
dc.subjectMolecular Biologyen
dc.subjectComputational Mathematicsen
dc.subjectComputer Science Applicationsen
dc.titleViPTree: the viral proteomic tree serveren
dc.typejournal article-
dc.type.niitypeJournal Article-
dc.identifier.jtitleBioinformaticsen
dc.identifier.volume33-
dc.identifier.issue15-
dc.identifier.spage2379-
dc.identifier.epage2380-
dc.relation.doi10.1093/bioinformatics/btx157-
dc.textversionauthor-
dc.identifier.pmid28379287-
dcterms.accessRightsopen access-
datacite.date.available2018-03-30-
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