ダウンロード数: 832
タイトル: | An integrated database of the ascidian, Ciona intestinalis: Towards functional genomics |
著者: | Satou, Yutaka https://orcid.org/0000-0001-5193-0708 (unconfirmed) Kawashima, Takeshi Shoguchi, Eiichi Nakayama, Akie Satoh, Nori |
著者名の別形: | 佐藤, 矩行 佐藤, ゆたか 川島, 武士 |
キーワード: | Ciona intestinalis ascidian genome expressed sequence tag (EST) integrated database |
発行日: | Aug-2005 |
出版者: | Zoological Society of Japan |
誌名: | Zoological Science |
巻: | 22 |
号: | 8 |
開始ページ: | 837 |
終了ページ: | 843 |
抄録: | An integrated genome database is essential for future studies of functional genomics. In this study, we update cDNA and genomic resources of the ascidian, Ciona intestinalis, and provide an integrated database of the genomic and cDNA data by extending a database published previously. The updated resources include over 190,000 ESTs (672,396 in total together with the previous ESTs) and over 1,000 full-insert sequences (6,773 in total). In addition, results of mapping information of the determined scaffolds onto chromosomes, ESTs from a full-length enriched cDNA library for indication of precise 5'-ends of genes, and comparisons of SNPs and indels among different individuals are integrated into this database, all of these results being reported recently. These advances continue to increase the utility of Ciona intestinalis as a model organism whilst the integrated database will be useful for researchers in comparative and evolutionary genomics. |
著作権等: | (c) 日本動物学会 / Zoological Society of Japan |
URI: | http://hdl.handle.net/2433/57197 |
DOI(出版社版): | 10.2108/zsj.22.837 |
出現コレクション: | Zoological Science |
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