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High contribution of Synechococcus to phytoplankton biomass in the aphotic hypolimnion in a deep freshwater lake (Lake Biwa, Japan) Takasu, Hiroyuki; Ushio, Masayuki; LeClair, E. LeClair; Nakano, Shin-ichi (2015-05-06) Aquatic Microbial Ecology, 75(1): 69-79
High-throughput sequencing shows inconsistent results with a microscope-based analysis of the soil prokaryotic community Ushio, Masayuki; Makoto, Kobayashi; Klaminder, Jonatan; Takasu, Hiroyuki; Nakano, Shin-ichi (2014-09) Soil Biology and Biochemistry, 76: 53-56
Effects of condensed tannins in conifer leaves on the composition and activity of the soil microbial community in a tropical montane forest Ushio, Masayuki; Balser, Teri C.; Kitayama, Kanehiro (2013-04) Plant and Soil, 365(1-2): 157-170
CARD-FISH analysis of prokaryotic community composition and abundance along small-scale vegetation gradients in a dry arctic tundra ecosystem Ushio, Masayuki; Makoto, Kobayashi; Klaminder, Jonatan; Nakano, Shin-ichi (2013-09) Soil Biology and Biochemistry, 64: 147-154
A coexisting fungal-bacterial community stabilizes soil decomposition activity in a microcosm experiment. Ushio, Masayuki; Miki, Takeshi; Balser, Teri C (2013-11-18) PloS one, 8(11)
Demonstration of the potential of environmental DNA as a tool for the detection of avian species Ushio, Masayuki; Murata, Koichi; Sado, Tetsuya; Nishiumi, Isao; Takeshita, Masamichi; Iwasaki, Wataru; Miya, Masaki (2018-03-14) Scientific Reports, 8
Empirical dynamic modeling for beginners Chang, Chun-Wei; Ushio, Masayuki; Hsieh, Chih-hao (2017-11) Ecological Research, 32(6): 785-796
Influence of potential grazers on picocyanobacterial abundance in Lake Biwa revealed with empirical dynamic modeling Cai, Ji; Hodoki, Yoshikuni; Ushio, Masayuki; Nakano, Shin-ichi (2020) Inland Waters, 10(3): 386-396
Water temperature-dependent degradation of environmental DNA and its relation to bacterial abundance Tsuji, Satsuki; Ushio, Masayuki; Sakurai, Sho; Minamoto, Toshifumi; Yamanaka, Hiroki (2017-04-27) PLOS ONE, 12(4)
Repressive chromatin modification underpins the long-term expression trend of a perennial flowering gene in nature Nishio, Haruki; Buzas, Diana M.; Nagano, Atsushi J.; Iwayama, Koji; Ushio, Masayuki; Kudoh, Hiroshi (2020-05-01) Nature Communications, 11